<?xml version="1.0" encoding="utf-8"?>
<journal>
<title>Iranian Journal of Virology</title>
<title_fa>مجله ویروس شناسی ایران</title_fa>
<short_title>Iran J Virol</short_title>
<subject>Medical Sciences</subject>
<web_url>http://journal.isv.org.ir</web_url>
<journal_hbi_system_id>1</journal_hbi_system_id>
<journal_hbi_system_user>admin</journal_hbi_system_user>
<journal_id_issn>1735-5680</journal_id_issn>
<journal_id_issn_online>2588-5030</journal_id_issn_online>
<journal_id_pii></journal_id_pii>
<journal_id_doi>10.21859/isv</journal_id_doi>
<journal_id_iranmedex></journal_id_iranmedex>
<journal_id_magiran></journal_id_magiran>
<journal_id_sid></journal_id_sid>
<journal_id_nlai></journal_id_nlai>
<journal_id_science></journal_id_science>
<language>en</language>
<pubdate>
	<type>jalali</type>
	<year>1401</year>
	<month>3</month>
	<day>1</day>
</pubdate>
<pubdate>
	<type>gregorian</type>
	<year>2022</year>
	<month>6</month>
	<day>1</day>
</pubdate>
<volume>16</volume>
<number>1</number>
<publish_type>online</publish_type>
<publish_edition>1</publish_edition>
<article_type>fulltext</article_type>
<articleset>
	<article>


	<language>en</language>
	<article_id_doi></article_id_doi>
	<title_fa></title_fa>
	<title>Immune-Related Genes Expression in HIV-Infected Patients with Discordance in CD4+T-Cell Levels</title>
	<subject_fa>تخصصي</subject_fa>
	<subject>Special</subject>
	<content_type_fa>پژوهشي</content_type_fa>
	<content_type>Original article</content_type>
	<abstract_fa></abstract_fa>
	<abstract>&lt;div style=&quot;border-bottom:solid windowtext 1.0pt; border-top:solid windowtext 1.0pt; border-left:none; border-right:none; padding:1.0pt 0in 1.0pt 0in&quot;&gt;
&lt;div style=&quot;border-bottom:solid windowtext 1.0pt; border-top:solid windowtext 1.0pt; border-left:none; border-right:none; padding:1.0pt 0in 1.0pt 0in&quot;&gt;&lt;span style=&quot;font-size:12pt&quot;&gt;&lt;span style=&quot;unicode-bidi:embed&quot;&gt;&lt;span new=&quot;&quot; roman=&quot;&quot; style=&quot;font-family:&quot; times=&quot;&quot;&gt;&lt;b&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;Background and Aims: &lt;/span&gt;&lt;/b&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;Antiretroviral therapy (ART) should significantly improve the recovery of the immune system in Human immunodeficiency virus (HIV) infected patients. In some patients under ART, it was not possible&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; &lt;span style=&quot;color:black&quot;&gt;to&lt;/span&gt;&lt;/span&gt; &lt;span style=&quot;font-size:11.0pt&quot;&gt;increase &lt;i&gt;CD4+&lt;/i&gt; cells reasonably in spite of effective virological control, which is known as discordant immune response (DIR). &lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;The aim of this study is the evaluation of &lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;the expression of C-X-C chemokine receptor type 4 (&lt;/span&gt;&lt;i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;CXCR4)&lt;/span&gt;&lt;/i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;,&lt;i&gt; &lt;/i&gt;&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;C-C chemokine receptor type 5 &lt;/span&gt;&lt;i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;(CCR5)&lt;/span&gt;&lt;/i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;,&lt;i&gt; &lt;/i&gt;&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;interleukin 12B&lt;/span&gt;&lt;i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; (IL12B)&lt;/span&gt;&lt;/i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;,&lt;i&gt; &lt;/i&gt;&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;cluster of differentiation 3(&lt;/span&gt;&lt;i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;CD3)&lt;/span&gt;&lt;/i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;,&lt;i&gt; &lt;/i&gt;&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;tumor necrosis factor alpha (&lt;/span&gt;&lt;i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;TNF&amp;alpha;), &lt;/span&gt;&lt;/i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;protein tyrosine kinase 2 beta&lt;/span&gt;&lt;i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; (PTK2B),&lt;/span&gt;&lt;/i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; and &lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;t-cell receptor&lt;em style=&quot;color:black&quot;&gt; &lt;/em&gt;beta&lt;/span&gt;&lt;i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; TCR &amp;beta;&lt;/span&gt;&lt;/i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; genes in patients with DIR&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;.&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;br&gt;
&lt;span style=&quot;font-size:12pt&quot;&gt;&lt;span style=&quot;unicode-bidi:embed&quot;&gt;&lt;span new=&quot;&quot; roman=&quot;&quot; style=&quot;font-family:&quot; times=&quot;&quot;&gt;&lt;b&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;Materials and Methods: &lt;/span&gt;&lt;/b&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;In this case-control study, &lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;peripheral blood mononuclear cell&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; (PBMC) specimens from patients of the two groups were isolated, RNA was extracted&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;: &lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;patients of the&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; control group who were immunologic responders and &lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;patients of the&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; case group, which were non-immunologic responders. &lt;span style=&quot;color:black&quot;&gt;Real-time relative quantitative &lt;/span&gt;&lt;/span&gt;&lt;em style=&quot;color:black&quot;&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;polymerase chain reaction&lt;/span&gt;&lt;/em&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;&lt;span style=&quot;color:black&quot;&gt; (PCR) was performed in duplicate using One Step PrimeScript&amp;trade; RT-PCR Kit and data analyzed by using GraphPad prism software version 8.0.2&lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;.&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;br&gt;
&lt;span style=&quot;font-size:12pt&quot;&gt;&lt;span style=&quot;unicode-bidi:embed&quot;&gt;&lt;span new=&quot;&quot; roman=&quot;&quot; style=&quot;font-family:&quot; times=&quot;&quot;&gt;&lt;b&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;Results:&lt;/span&gt;&lt;/b&gt; &lt;span style=&quot;font-size:11.0pt&quot;&gt;&lt;span style=&quot;color:black&quot;&gt;The expression levels in the &lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;patients of the&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;&lt;span style=&quot;color:black&quot;&gt; case group in comparison with the &lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;patients of the&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;&lt;span style=&quot;color:black&quot;&gt; control group were measured for &lt;i&gt;CXCR4&lt;/i&gt;,&lt;i&gt; CCR5&lt;/i&gt;,&lt;i&gt; IL12B&lt;/i&gt;,&lt;i&gt; TNF-&amp;alpha;&lt;/i&gt;,&lt;i&gt; CD3&lt;/i&gt;,&lt;i&gt; PTK2B&lt;/i&gt; and&lt;i&gt; TCR-&amp;beta;&lt;/i&gt;. The Fold change ratio for&lt;i&gt; &lt;/i&gt;&lt;/span&gt;&lt;/span&gt;&lt;i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;CCR5&lt;/span&gt;&lt;/i&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;,&lt;i&gt; TCR-&amp;beta;&lt;/i&gt;, and &lt;i&gt;CD3&lt;/i&gt; were (0.225), (0.12), (0.09), respectively, and in all three of them, a significant decrease was observed with confidence values. p &lt;0.05, p &lt;0.02 and p &lt;0.01, respectively. None of the &lt;i&gt;CXCR4&lt;/i&gt;, &lt;i&gt;&lt;span style=&quot;color:black&quot;&gt;IL12B&lt;/span&gt;&lt;/i&gt;&lt;span style=&quot;color:black&quot;&gt;, &lt;i&gt;TNF-&amp;alpha;&lt;/i&gt;, and &lt;i&gt;PTK2B&lt;/i&gt; &lt;/span&gt;was statistically &lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;significantly different&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; and their fold change ratio was &lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;(1.01), (0.6), (1.04), and (0.718) respectively.&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;br&gt;
&lt;span style=&quot;font-size:12pt&quot;&gt;&lt;span style=&quot;unicode-bidi:embed&quot;&gt;&lt;span new=&quot;&quot; roman=&quot;&quot; style=&quot;font-family:&quot; times=&quot;&quot;&gt;&lt;b&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;Conclusion: &lt;/span&gt;&lt;/b&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;we showed &lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;significant decrease in &lt;span style=&quot;color:black&quot;&gt;the expression of &lt;i&gt;CCR5&lt;/i&gt;&lt;/span&gt;, &lt;i&gt;TCR-&amp;beta;&lt;/i&gt;, and &lt;i&gt;CD3&lt;/i&gt; genes in the&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; patients of the&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; case group in comparison with the &lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;patients of the&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt; control group, but we could not verify this low expression of these genes are the reason of &lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;the low &lt;i&gt;CD4+&lt;/i&gt; T-cell count&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;. Further investigation is necessary, if the suppression of these genes can influence the proliferation or development of &lt;i&gt;CD4&lt;/i&gt; T cells, in-vitro&lt;/span&gt;&lt;span style=&quot;font-size:11.0pt&quot;&gt;.&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/div&gt;
&lt;/div&gt;</abstract>
	<keyword_fa></keyword_fa>
	<keyword>HIV-1, discordant immune response, CD4+ cell count, gene expression, cytokine</keyword>
	<start_page>59</start_page>
	<end_page>65</end_page>
	<web_url>http://journal.isv.org.ir/browse.php?a_code=A-10-308-1&amp;slc_lang=en&amp;sid=1</web_url>


<author_list>
	<author>
	<first_name>Kiana</first_name>
	<middle_name></middle_name>
	<last_name>Kolbadi</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>kkianakolbadi@gmail.com</email>
	<code>10031947532846006626</code>
	<orcid>10031947532846006626</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Department of biology, East Tehran Branch, Islamic Azad University, Tehran, Iran</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Elaheh</first_name>
	<middle_name></middle_name>
	<last_name>Aliasgari</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>e.asgari@gmail.com</email>
	<code>10031947532846006627</code>
	<orcid>10031947532846006627</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Department of biology, East Tehran Branch, Islamic Azad University, Tehran, Iran</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Parya</first_name>
	<middle_name></middle_name>
	<last_name>Basimi</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>parya.bassimi@gmail.com</email>
	<code>10031947532846006628</code>
	<orcid>10031947532846006628</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Hepatitis and AIDS Department, Pasteur Institute of Iran, Tehran, Iran</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Masoumeh</first_name>
	<middle_name></middle_name>
	<last_name>Ashtiani</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>mfarrokhashtiani@yahoo.com</email>
	<code>10031947532846006629</code>
	<orcid>10031947532846006629</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Department of Infectious Diseases and Tropical Medicine, Tehran University of Medical Sciences, Tehran, Iran.</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Mohammad</first_name>
	<middle_name></middle_name>
	<last_name>Panahi</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>mohammad.panahi.ali110@gmail.com</email>
	<code>10031947532846006630</code>
	<orcid>10031947532846006630</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Department of Biology, East Tehran Branch, Islamic Azad University, Tehran, Iran.</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Kazem</first_name>
	<middle_name></middle_name>
	<last_name>Baesi</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>kbaesi@gmail.com</email>
	<code>10031947532846006631</code>
	<orcid>10031947532846006631</orcid>
	<coreauthor>Yes
</coreauthor>
	<affiliation>Hepatitis and AIDS Department, Pasteur Institute of Iran, Tehran, Iran</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


</author_list>


	</article>
</articleset>
</journal>
